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Species belonging to selected taxon:

Nicotiana benthamiana



ABOUT THIS RECORD

ID: MNEST001600
species: Nicotiana benthamiana
miRNA family: MIR166
source: miRNEST

Taxonomy by NCBI:
Nicotiana benthamiana Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCCCC

miRNA*
GGAATGTCGTTTGGCTCGAGG

mismatches: 3
bulges: 0

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pre-miRNA
AAAAGGAAGCTTTTCTATTGTGGGGAATGTCGTTTGGCTCGAGGATTCTTCAATCTTGATCAAATTCTTACTTTTTTTATAGATCTGTATATCAATATAT
AGAGATCCATAATATTGAATTATGTTTTTGGTATCGTCGGACCAGGCTTCATTCCCCTCAAAGATTGCTACCACTCA


dot-bracket secondary structure
....((.(((...(((.(((.((((((((..((((((.((((.(((...((((....(((..(((((.........((((.(((((.(((((....))))
).))))).))))....)))))..))).)))).))).)))).))))))..)))))))).))))))..))).)).....



SIMILARITIES
miRBase ath-MIR165b: 0.000000002

PMRD ath-miR165b: 0.000000002

microPC miR166: 0.0000000001
UniProt no hits

RFAM mir-166: 0.00000004
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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